@article{GhorbaniSCA2020,
  title={Probabilistic Character Motion Synthesis using a Hierarchical Deep Latent Variable Model},
  author={Ghorbani, Saeed and Wloka, Calden and Etemad, Ali and Brubaker, Marcus A. and Troje, Nikolaus F.},
  journal={{Computer Graphics Forum (to appear)}},
  year={2020}
}

@inproceedings{JainiICML2020Tails,
  title={Tails of Lipschitz Triangular Flows},
  author={Jaini, Priyank and Kobyzev, Ivan and Brubaker, Marcus A. and Yu, Yaoliang},
  booktitle={{Proceedings of the International Conference on Machine Learning (ICML)}},
  year={2020},
  eprint={1907.04481},
  archivePrefix={arXiv},
  primaryClass={math.ST},
  url_arXiv={https://arxiv.org/abs/1907.04481}
}

@article{KobyzevPAMI2020,
  title={Normalizing Flows: An Introduction and Review of Current Methods},
  author={Kobyzev, Ivan and Prince, Simon J.D. and Brubaker, Marcus A.},
  journal={{IEEE Transactions on Pattern Analysis and Machine Intelligence (PAMI)}},
  year={2020},
  eprint={1908.09257},
  archivePrefix={arXiv},
  primaryClass={stat.ML},
  url_arXiv={https://arxiv.org/abs/1908.09257}
}

@inproceedings{GoelAAAI2020,
  title={{Diachronic Embedding for Temporal Knowledge Graph Completion}},
  author={Rishab Goel and Seyed Mehran Kazemi and Marcus A. Brubaker and Pascal Poupart},
  booktitle={{Proceedings of AAAI Conference on Artificial Intelligence (AAAI)}},
  year={2020},
  eprint={1907.03143},
  archivePrefix={arXiv},
  primaryClass={cs.LG},
  url_arXiv = {https://arxiv.org/abs/1907.03143},
  url_Paper={GoelAAAI2020.pdf}
}

@inproceedings{AbdelhamedICCV2019,
  title={{Noise Flow: Noise Modeling with Conditional Normalizing Flows}},
  author={Abdelrahman Abdelhamed and Marcus A. Brubaker and Michael S. Brown},
  booktitle={{Proceedings of IEEE International Conference on Computer Vision (ICCV)}},
  year={2019},
  eprint={1908.08453},
  archivePrefix={arXiv},
  primaryClass={cs.CV},
  url_arXiv = {https://arxiv.org/abs/1908.08453},
  url_Paper={AbdelhamedICCV2019.pdf},
  url_Supplemental={AbdelhamedICCV2019-Supplemental.pdf}
}

@inproceedings{MasoumzadehBMVC2019,
  title={{HydraPicker: Fully Automated Particle Picking in Cryo-EM by Utilizing Dataset Bias in Single Shot Detection}},
  author={Abbas Masoumzadeh and Marcus A. Brubaker},
  booktitle={{Proceedings of the British Machine Vision Conference (BMVC)}},
  year={2019},
  url_Paper={MasoumzadehBMVC2019.pdf},
  url_Supplemental={MasoumzadehBMVC2019-Supplemental.zip},
  url_Code={https://github.com/AbbasMZ/HydraPicker_Colab}
}

@inproceedings{UllrichUAI2019,
  title={{Differentiable probabilistic models of scientific imaging with the Fourier slice theorem}},
  author={Karen Ullrich and Rianne van den Berg and Marcus A. Brubaker and David J. Fleet and Max Welling},
  booktitle={{Proceedings of Conference on Uncertainty in Artificial Intelligence (UAI)}},
  year={2019},
  eprint={1906.07582},
  archivePrefix={arXiv},
  primaryClass={cs.LG},
  url_arXiv = {https://arxiv.org/abs/1906.07582},
  url_Paper={UllrichUAI2019.pdf},
  url_OpenReview={https://openreview.net/forum?id=rJG7g9xnL4}
}

@inproceedings{SharmaIJCAI2019,
  title={{On the Effectiveness of Low Frequency Perturbations}},
  author={Yash Sharma and Gavin Weiguang Ding and Marcus A. Brubaker},
  booktitle={{Proceedings of International Joint Conferences on Artificial Intelligence (IJCAI)}},
  year={2019},
  eprint={1903.00073},
  archivePrefix={arXiv},
  primaryClass={cs.CV},
  url_Paper={SharmaIJCAI2019.pdf},
  url_arXiv={https://arxiv.org/abs/1903.00073}
}

@inproceedings{Tesfaldet2018,
  author = {Matthew Tesfaldet and Marcus A. Brubaker and Konstantinos G. Derpanis},
  title = {{Two-Stream Convolutional Networks for Dynamic Texture Synthesis}},
  booktitle = {{Proceedings of IEEE Conference on Computer Vision and Pattern Recognition (CVPR)}},
  year = {2018},
  eprint={1706.06982},
  archivePrefix={arXiv},
  primaryClass={cs.CV},
  url_Website = {https://ryersonvisionlab.github.io/two-stream-projpage/},
  url_Paper = {Tesfaldet2017.pdf},
  url_arXiv = {http://arxiv.org/abs/1706.06982},
}

@inproceedings{LivneCRV2018,
  author = {Micha Livne and Leonid Sigal and Marcus A. Brubaker and David J. Fleet},
  title = {{Walking on Thin Air: Environment-Free Physics-based Markerless Motion Capture}},
  booktitle = {{Proceedings of the Conference on Computer and Robot Vision (CRV)}},
  year = {2018},
  eprint={1812.01203},
  archivePrefix={arXiv},
  primaryClass={cs.CV},
  url_arXiv = {http://arxiv.org/abs/1812.01203},
  url_Paper = {LivneCRV2018.pdf},
  url_Supplemental = {LivenCRV2018-Supplemental.pdf},
  url_Website = {https://research.seraphlabs.ca/u-of-t/performance-capture/},
  url_Video = {LivneCRV2018-Video.mp4}
}

@article{PunjaniNatureMethods2017,
  author = {Ali Punjani and John L. Rubinstein and David J. Fleet and Marcus A. Brubaker},
  title = {{cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination}},
  journal = {{Nature Methods}},
  year = {2017},
  volume = {14},
  number = {3},
  pages = {{290 -- 296}},
  url_Preprint = {PunjaniCryoSPARCNMeth2017.pdf},
  url_Paper = {http://rdcu.be/o3Ac},
  url_Software = {https://cryosparc.com},
}

@article{CarpenterJSS2017,
  author = {Bob Carpenter and Andrew Gelman and Matt Hoffman and Daniel Lee and Ben Goodrich and Michael Betancourt and Marcus A. Brubaker and Jiqiang Guo and Peter Li and Allen Riddell},
  title = {{Stan: A Probabilistic Programming Language}},
  journal = {{Journal of Statistical Software}},
  volume = {76},
  number = {1},
  year = {2017},
  url_Paper = {CarpenterJSS2017.pdf},
  url_Website = {https://www.jstatsoft.org/article/view/v076i01},
  url_Software = {http://mc-stan.org},
}

@inproceedings{MaLost2ICRA2017,
  author = {Wei-Chiu Ma and Shenlong Wang and Marcus A. Brubaker and Sanja Fidler and Raquel Urtasun},
  title = {{Find your Way by Observing the Sun and Other Semantic Cues}},
  booktitle = {{IEEE Interational Conference on Robotics and Automation (ICRA)}},
  year = {2017},
  eprint={1606.07415},
  archivePrefix={arXiv},
  primaryClass={cs.CV},
  url_Paper = {MaLost2ICRA2017.pdf},
  url_arXiv = {http://arxiv.org/abs/1606.07415},
  url_YouTube = {https://youtu.be/tOVWptik0qI}
}


@inproceedings{LuoLIDCWACV2017,
  author = {Zhi Hao Luo and Marcus A. Brubaker and Michael Brudno},
  title = {{Size and Texture-based Classification of Lung Tumors with 3D CNNs}},
  booktitle = {{IEEE Winter Conference on Applications of Computer Vision (WACV)}},
  year = {2017},
  url_Paper = {LuoLIDCWACV2017.pdf}
}

@article{DuezJFS2017,
  author = {Pierre Duez and Todd Weller and Marcus A. Brubaker and Richard E. Hockensmith and Ryan Lilien},
  title = {Development and validation of a virtual examination tool for firearm forensics},
  journal = {Journal of Forensic Sciences},
  year = {2017},
  url_Paper = {https://doi.org/10.1111/1556-4029.13668}
}

@article{BrubakerCryoEMPAMI2016,
  author = {Ali Punjani and Marcus A. Brubaker and David J. Fleet},
  title = {{Building Proteins in a Day: Efficient 3D Molecular Structure Estimation with Electron Cryomicroscopy}},
  journal = {{IEEE Transactions on Pattern Analysis and Machine Intelligence (PAMI)}},
  year = {2016},
  url_Paper = {PunjaniCryoEMPAMI2016.pdf}
}


@article{BrubakerLostPAMI2016,
  author = {Marcus A. Brubaker and Andreas Geiger and Raquel Urtasun},
  title = {{Map-based Probabilistic Visual Self-Localization}},
  journal = {{IEEE Transactions on Pattern Analysis and Machine Intelligence (PAMI)}},
  year = {2016},
  url_Paper = {BrubakerLostPAMI2016.pdf}
}

@inproceedings{WangDeepGPAISTATS2016,
  author = {Yali Wang and Marcus A. Brubaker and Brahim Chaib-draa and Raquel Urtasun},
  title = {{Sequential Inference for Deep Gaussian Process}},
  booktitle = {{Proceedings of Nineteenth International Conference on Artificial Intelligence and Statistics (AISTATS)}},
  year = {2016},
  url_Paper = {WangDeepGPAISTATS2016.pdf},
}

@inproceedings{BrubakerCryoEMCVPR2015,
  author = {Marcus A. Brubaker and Ali Punjani and David J. Fleet},
  title = {{Building Proteins in a Day: Efficient 3D Molecular Reconstruction}},
  booktitle = {{Proceedings of IEEE Conference on Computer Vision and Pattern Recognition (CVPR)}},
  year = {2015},
  eprint={1504.03573},
  archivePrefix={arXiv},
  primaryClass={cs.CV},
  url_Paper = {BrubakerCryoEMCVPR2015.pdf},
  url_arXiv = {http://arxiv.org/abs/1504.03573},
  url_Extended_Abstract = {BrubakerCryoEMCVPR2015-ExtAbs.pdf},
  url_GitHub = {https://github.com/mbrubake/cryoem-cvpr2015},
  url_Presentation = {http://techtalks.tv/talks/building-proteins-in-a-day-efficient-3d-molecular-reconstruction/61603/}
}

@article{WellerAFTEJournal2015,
  author = {Todd Weller and Marcus A. Brubaker and Pierre Duez and Ryan Lilien},
  title = {{Introduction and Initial Evaluation of a Novel Three-Dimensional Imaging and Analysis System for Firearm Forensics}},
  journal = {{Association of Firearm and Tool Mark Examiners (AFTE) Journal}},
  volume = {47},
  number = {4},
  pages = {198 -- 208},
  year = {2015},
  url_Journal = {https://afte.org/afte-journal}
}

@article{RubinsteinCryoEMAlignment2015,
  author = {John L. Rubinstein and Marcus A. Brubaker},
  title = {{Alignment of cryo-EM movies of individual particles by optimization of image translations}},
  journal = {{Journal of Structural Biology}},
  volume = {192},
  number = {2},
  pages = {188 -- 195},
  year = {2015},
  eprint={1409.6789},
  archivePrefix={arXiv},
  primaryClass={q-bio.QM},
  url_arXiv = {http://arxiv.org/abs/1409.6789},
  url_Paper = {http://dx.doi.org/10.1016/j.jsb.2015.08.007},
}

@article{ZhaoJSBAnisotropy2015,
  title = {{Description and comparison of algorithms for correcting anisotropic magnification in cryo-EM images}},
  author = {Jianhua  Zhao and Marcus A. Brubaker and Samir Benlekbir and John L. Rubinstein},
  journal = {{Journal of Structural Biology}},
  volume = {192},
  number = {2},
  pages = {209 -- 215},
  year = {2015},
  eprint={1501.05928},
  archivePrefix={arXiv},
  primaryClass={physics.ins-det},
  url_arXiv = {http://arxiv.org/abs/1501.05928},
  url_Paper = {http://dx.doi.org/10.1016/j.jsb.2015.06.014},
}

@article{Cao2015,
  author = {Yanshuai Cao and Marcus A. Brubaker and David J. Fleet and Aaron Hertzmann},
  title = {{Efficient Optimization for Sparse Gaussian Process Regression}},
  journal = {{IEEE Transactions on Pattern Analysis and Machine Intelligence (PAMI)}},
  volume = {37},
  number = {12},
  pages = {2415 -- 2427},
  year = {2015},
  url_Paper = {Cao2015.pdf},
}

@INPROCEEDINGS{Wang2014,
  author = {Yali Wang and Marcus A. Brubaker and Brahim Chaib-draa and Raquel Urtasun},
  title = {{Bayesian Filtering with Online Gaussian Process Latent Variable Models}},
  booktitle = {{Proceedings of Conference on Uncertainty in Artificial Intelligence (UAI)}},
  year = {2014},
  url_Paper = {Wang2014.pdf},
}

@INPROCEEDINGS{Cao2013,
  author = {Yanshuai Cao and Marcus A. Brubaker and Aaron Hertzmann and David J. Fleet},
  title = {{Efficient Optimization for Sparse Gaussian Process Regression}},
  booktitle = {{Proceedings of Neural Information Processing Systems (NIPS)}},
  year = {2013},
  eprint={1310.6007},
  archivePrefix={arXiv},
  primaryClass={cs.LG},
  url_Paper = {Cao2013.pdf},
  url_arXiv = {http://arxiv.org/abs/1310.6007},
  url_Website = {http://www.cs.toronto.edu/~caoy/opt_sgpr},
  url_Proceedings = {http://papers.nips.cc/paper/5087-efficient-optimization-for-sparse-gaussian-process-regression}
}

@INPROCEEDINGS{Brubaker2013,
  author = {Marcus A. Brubaker and Andreas Geiger and Raquel Urtasun},
  title = {{Lost! Leveraging the Crowd for Probabilistic Visual Self-Localization}},
  booktitle = {{Proceedings of IEEE Conference on Computer Vision and Pattern Recognition (CVPR)}},
  year = {2013},
  url_Paper = {Brubaker2013.pdf},
  url_Supplemental = {Brubaker2013-Supplemental.pdf},
  url_Poster = {Brubaker2013-Poster.pdf},
  url_Slides = {Brubaker2013-Slides.pdf},
  url_Presentation = {http://techtalks.tv/talks/lost-leveraging-the-crowd-for-probabilistic-visual-self-localization/58677/},
  url_Video = {Brubaker2013-Video.mp4},
  url_YouTube = {http://youtu.be/4Z3shNPOdQA},
  url_Website = {http://www.cs.toronto.edu/~mbrubake/projects/map},
}

@ARTICLE{Zhao2013,
  author = {Jianhua Zhao and Marcus A. Brubaker and John L. Rubinstein},
  title = {{TMaCS: A hybrid template matching and classification system for partially-automated particle selection}},
  journal = {Journal of Structural Biology},
  volume = {181},
  number = {3},
  pages = {234 -- 242},
  year = {2013},
  url_Paper = {http://dx.doi.org/10.1016/j.jsb.2012.12.010},
  url_Code = {http://www.sickkids.ca/Research/Rubinstein/Software/index.html},
}
 
@INPROCEEDINGS{BrubakerAISTATS2012,
  author = {Marcus A. Brubaker and Mathieu Salzmann and Raquel Urtasun},
  title = {{A Family of {MCMC} Methods on Implicitly Defined Manifolds}},
  booktitle = {Proceedings of the Fifteenth International Conference on Artificial Intelligence and Statistics (AISTATS)},
  year = {2012},
  url_Paper = {BrubakerAISTATS2012.pdf},
  url_Poster = {BrubakerAISTATS2012-Poster.pdf},
  url_Website = {http://www.cs.toronto.edu/~mbrubake/projects/cmcmc}
}

@ARTICLE{BrubakerIJCV2010,
  author = {Marcus A. Brubaker and David J. Fleet and Aaron Hertzmann},
  title = {{Physics-based Person Tracking using the Anthropomorphic Walker}},
  journal = {International Journal of Computer Vision (IJCV)},
  volume = {87},
  pages = {140--155},
  number = {1},
  year = {2010},
  url_Paper = {BrubakerIJCV2010.pdf},
  url_Website = {http://www.cs.toronto.edu/~mbrubake/permanent/awalker}
}

@ARTICLE{Jaitly2010,
  author = {Navdeep Jaitly and Marcus A. Brubaker and John Rubinstein and Ryan H. Lilien},
  title = {{A Bayesian Method for 3-D Macromolecular Structure Inference using Class Average Images from Single Particle Electron Microscopy}},
  journal = {Bioinformatics},
  year = {2010},
  volume = {26},
  pages = {2406-2415},
  url_Paper = {http://bioinformatics.oxfordjournals.org/cgi/reprint/btq456?ijkey=TR5pnBrtbyXdqN6&keytype=ref},
  url_Website = {http://compbio.cs.toronto.edu/cryoem/}
}

@INCOLLECTION{BrubakerAISE2009,
  author = {Marcus A. Brubaker and Leonid Sigal and David J. Fleet},
  title = {{Video-based People Tracking}},
  booktitle = {Handbook on Ambient Intelligence and Smart Environments},
  publisher = {Springer Verlag},
  editor = {H. Nakashima and H. Aghajan and J.C. Augusto},
  year = {2009},
  url_Paper = {BrubakerAISE2009.pdf},
}

@INPROCEEDINGS{BrubakerICCV2009,
  author = {Marcus A. Brubaker and Leonid Sigal and David J. Fleet},
  title = {{Estimating Contact Dynamics}},
  booktitle = {{Proceedings of IEEE International Conference on Computer Vision (CVPR)}},
  year = {2009},
  url_Paper = {BrubakerICCV2009.pdf},
  url_MocapResults = {BrubakerICCV2009-MocapResults.avi},
  url_MocapYouTube = {http://youtu.be/RbL0zx53DQg},
  url_VideoResults = {BrubakerICCV2009-VideoResults.avi},
  url_VideoYouTube = {http://youtu.be/NZ4U8oO--6M},
}

@INPROCEEDINGS{BrubakerCVPR2008,
  author = {Marcus A. Brubaker and David J. Fleet},
  title = {{The Kneed Walker for Human Pose Tracking}},
  booktitle = {{Proceedings of IEEE Conference on Computer Vision and Pattern Recognition (CVPR)}},
  year = {2008},
  url_Paper = {BrubakerCVPR2008.pdf},
  url_Video = {BrubakerCVPR2008-Results.avi},
  url_YouTube = {http://youtu.be/-rUM4ZxCD0I},
}

@INPROCEEDINGS{Brubaker2007,
  author = {Marcus A. Brubaker and David J. Fleet and Aaron Hertzmann},
  title = {Physics-based person tracking using simplified lower-body dynamics},
  booktitle = {{Proceedings of IEEE Conference on Computer Vision and Pattern Recognition (CVPR)}},
  year = {2007},
  url_Paper = {BrubakerCVPR2007.pdf},
  url_Video = {BrubakerCVPR2007-Results.avi},
  url_YouTube = {http://youtu.be/IZhl9Fo7eUI},
}


@inproceedings{Deng2020Modeling,
  title={Modeling Continuous Stochastic Processes with Dynamic Normalizing Flows},
  author={Ruizhi Deng and Bo Chang and Marcus A. Brubaker and Greg Mori and Andreas Lehrmann},
  year={2020},
  booktitle = {{ICML Workshop on Invertible Neural Networks, Normalizing Flows, and Explicit Likelihood Models}},
  eprint={2002.10516},
  archivePrefix={arXiv},
  primaryClass={cs.LG},
  url_arXiv = {https://arxiv.org/abs/2002.10516}
}

@inproceedings{GoelNIPSW2019,
  author = {Rishab Goel and Seyed Mehran Kazemi and Marcus A. Brubaker and Pascal Poupart},
  title = {{Diachronic Embedding for Temporal Knowledge Graph Completion}},
  booktitle = {{NeurIPS Workshop on Graph Representation Learning}},
  month = {December},
  year = {2019},
  eprint={1907.03143},
  archivePrefix={arXiv},
  primaryClass={cs.LG},
  url_arXiv = {https://arxiv.org/abs/1907.03143}
}

@inproceedings{MehrasaNIPSW2019,
  author = {Nazanin Mehrasa and Ruizhi Deng and Jiawei He and Bo Chang and Thibaut Durand and Mohamed Osama Ahmed and Marcus A. Brubaker and Greg Mori},
  title = {{Point Process Flows}},
  booktitle = {{NeurIPS Workshop on Learning with Temporal Point Processes}},
  month = {December},
  year = {2019},
  eprint={1910.08281},
  archivePrefix={arXiv},
  primaryClass={cs.LG},
  url_arXiv = {https://arxiv.org/abs/1910.08281}
}

@inproceedings{TesfaldetECCVW2018,
  title={{Convolutional Photomosaic Generation via Multi-scale Perceptual Losses}},
  author={Matthew Tesfaldet and Nariman Saftarli and Marcus A. Brubaker and Konstantinos G. Derpanis},
  booktitle={{ECCV Workshop on Computer Vision for Fashion, Art and Design}},
  year={2018},
  url_Website = {https://ryersonvisionlab.github.io/perceptual-photomosaic-projpage/},
  url_Paper = {TesfaldetECCVW2018.pdf}
} 

@article{PunjaniMM2018,
  title={Algorithmic Advances in Single Particle Cryo-EM Data Processing},
  volume={24},
  DOI={10.1017/S143192761800483X},
  number={S1},
  journal={Microscopy and Microanalysis},
  publisher={Cambridge University Press},
  author={Ali Punjani and Haowei Zhang and John Rubinstein and Marcus A. Brubaker and David J. Fleet},
  year={2018},
  pages={868-869},
  url_Paper = {https://www.cambridge.org/core/journals/microscopy-and-microanalysis/article/algorithmic-advances-in-single-particle-cryoem-data-processing/61EF1BBF379A76834B4347E8712A2E9A}
}

@inproceedings{BlakeNIPSW2018,
  author = {Christopher Blake and Luyu Wang and Giuseppe Castiglione and Christopher Srinivasa and Marcus A. Brubaker},
  title = {On Learning Wire-Length Efficient Neural Networks},
  booktitle = {{NeurIPS 2018 Workshop on Compact Deep Neural Network Representation with Industrial Applications}},
  month = {December},
  year = {2018}
}

@inproceedings{CarpenterADMB2016,
  author = {Bob Carpenter and Matthew D. Hoffman and Marcus A. Brubaker and Daniel Lee and Michael Betancourt and Sebastian Weber and Rob Trangucci},
  title = {{Algorithmic Differentiation in the Stan Math C++ Library}},
  booktitle = {{ADMB Developers Workshop}},
  month = {June},
  year = {2016}
}

@inproceedings{BrubakerCryoEMBIC2015,
  author = {Marcus A. Brubaker and Ali Punjani and David J. Fleet},
  title = {{Efficient 3D Macromolecular Reconstruction with Electron Cryomicroscopy}},
  booktitle = {{BioImage Computing Workshop at IEEE Conference on Computer Vision and Pattern Recognition}},
  month = {June},
  year = {2015}
}

@inproceedings{BrubakerCryoEMNIPS2014,
  author = {Ali Punjani and Marcus A. Brubaker},
  title = {{Microscopic Advances with Large-Scale Learning: Stochastic Optimization for Cryo-EM}},
  booktitle = {{Neural Information Processing Systems Workshop: Machine Learning in Computational Biology (MLCB)}},
  month = {December},
  year = {2014},
  eprinttype={arxiv},
  eprint = {1501.04656},
  url_arXiv = {http://arxiv.org/abs/1501.04656},
}

@INPROCEEDINGS{Brubaker2013WS,
  author = {Marcus A. Brubaker  and Andreas Geiger and Raquel Urtasun},
  title = {{Probabilistic Map Localization Through Visual Odometry}},
  booktitle = {{Proceedings of SUNw: Scene Understanding Workshop at IEEE Conference on Computer Vision and Pattern Recognition (CVPRW)}},
  year = {2013},
  url_Paper = {Brubaker2013WS.pdf},
  url_Workshop = {http://sunw.csail.mit.edu/2013},
}

@inproceedings{Jaitly2009,
  author = {Navdeep Jaitly and Marcus A. Brubaker and John Rubinstein and Ryan Lilien},
  title = {{A Bayesian method for 3D reconstruction of macromolecular structure using class averages from single particle electron microscopy}},
  booktitle = {Neural Information Processing Systems Workshop: Machine Learning in Computational Biology (MLCB)},
  month = {December},
  year = {2009},
}

@inproceedings{Brubaker2006,
  author = {Marcus A. Brubaker and David J. Fleet and Aaron Hertzmann},
  title = {{Physics-based Human Pose Tracking}},
  booktitle = {Neural Information Processing Systems Workshop: Evaluation of Articulated Human Motion and Pose Estimation (EHuM)},
  month = {December},
  year = {2006},
}


@misc{Deng2020Variational,
    title={Variational Hyper RNN for Sequence Modeling},
    author={Ruizhi Deng and Yanshuai Cao and Bo Chang and Leonid Sigal and Greg Mori and Marcus A. Brubaker},
    year={2020},
    eprint={2002.10501},
    archivePrefix={arXiv},
    primaryClass={cs.LG},
    url_arXiv = {https://arxiv.org/abs/2002.10501},
}

@misc{Kazemi2019Time2Vec,
    title={Time2Vec: Learning a Vector Representation of Time},
    author={Seyed Mehran Kazemi and Rishab Goel and Sepehr Eghbali and Janahan Ramanan and Jaspreet Sahota and Sanjay Thakur and Stella Wu and Cathal Smyth and Pascal Poupart and Marcus Brubaker},
    year={2019},
    eprint={1907.05321},
    archivePrefix={arXiv},
    primaryClass={cs.LG},
    url_arXiv = {https://arxiv.org/abs/1907.05321}
}

@article{BrubakerTechVibes2018,
  author = {Marcus A. Brubaker},
  title = {{The Integral Cross-Discipline Approach to Pushing AI Research}},
  journal = {techvibes.com},
  month = {February},
  year = {2018},
  url = {https://techvibes.com/2018/02/07/the-integral-cross-discipline-approach-to-pushing-ai-research}
}

@inproceedings{PunjaniGRC2017,
  author = {Ali Punjani and John Rubinstein and David J. Fleet and Marcus A. Brubaker},
  title = {{New algorithms in cryoSPARC}},
  booktitle = {{Three Dimensionl Electron Microscopy Gordon Research Conference}},
  month = {June},
  year = {2017}
}

@misc{CarpenterStanAD2015,
  author = {Bob Carpenter and Matthew D. Hoffman and Marcus A. Brubaker and Daniel Lee and Peter Li and Michael Betancourt},
  title = {{The Stan Math Library: Reverse-Mode Automatic Differentiation in C++}},
  archivePrefix = "arXiv",
  eprint = {1509.07164},
  primaryClass = "cs.MS",
  year = {2015},
  url_arXiv = {http://arxiv.org/abs/1509.07164},
}

@inproceedings{LilienAFTE2014,
  author = {Ryan Lilien and Marcus A. Brubaker and Todd Weller},
  title = {{Progress Towards a Novel 3D-Topography Imaging and Analysis System for Firearm Identification, TopMatch-GS, and Results of a Large-Scale Study}},
  booktitle = {The Association of Firearm and Tool Mark Examiners Annual Training Seminar},
  month = {May},
  year = {2014},
}

@inproceedings{LilienAFTE2013,
  author = {Ryan Lilien and Marcus A. Brubaker and Todd Weller},
  title = {{Development of a 3D-Topography Imaging and Analysis System for Firearm Identification using GelSight and Feature Based Case Matching}},
  booktitle = {The Association of Firearm and Tool Mark Examiners Annual Training Seminar},
  month = {June},
  year = {2013},
}

@inproceedings{LilienIPES2012,
  author = {Ryan Lilien and Marcus A. Brubaker and Todd Weller and Micah Johnson},
  title = {{Three-Dimensional Topography System for Firearm Identification using GelSight}},
  booktitle = {NIJ and FBI Impression and Pattern Evidence Symposium, Clearwater, Florida},
  month = {August},
  year = {2012},
}

@inproceedings{BrubakerNIST2012,
  author = {Marcus A. Brubaker and Ryan Lilien and Todd Weller and Micah Johnson},
  title = {{Surface Topography Measurement using GelSight Elastomeric Sensor for Firearm Forensics}},
  booktitle = {NIST Conference on Measurement Science and Standards in Forensic Firearms Analysis, Gaithersburg, Maryland},
  month = {July},
  year = {2012},
}

@PHDTHESIS{BrubakerPhD2011,
  author = {Marcus A. Brubaker},
  title = {{Physical Models of Human Motion for Estimation and Scene Analysis}},
  school = {University of Toronto},
  year = {2011},
  url_Thesis = {PhDThesis.pdf}
}

@misc{BrubakerICCVTut2009,
  author = {Marcus A. Brubaker and Leonid Sigal and David J. Fleet},
  title = {{Physics-based Human Motion Modelling for people tracking: A short tutorial}},
  howpublished = {Tutorial at IEEE International Conference of Computer Vision, Kyoto,
	Japan},
  year = {2009},
}

@MASTERSTHESIS{BrubakerMSc2006,
  author = {Marcus A. Brubaker},
  title = {Physics-Based Priors for Human Pose Tracking},
  school = {University of Toronto},
  year = {2006},
  url_Thesis = {MScThesis.pdf}
}